How can I sync my iPhone with a new iTunes library and not loose apps?

Up until a few days ago I was syncing my iPhone with my PC notebook. Long story short, the machine crashed and I had to re-install. luckily I had a backup of all of the music from my iTunes library which is now hosted on my Mac Mini, but I didn't have a copy of my apps (why iTunes keeps these files outside of the folder I kept my library in I don't know).
Now I'm syncing music and video with my Mac Mini, but when I select that I want to sync apps I get the message that everything on the phone will be deleted.. Is there a way to back up the apps so I can add them to the library and sync them back to the phone without losing them?

I had the same issue with a withdrawn app. Just copy all the .app files from the old directory to somewhere on the new machine, then drag them onto the Application menu item on the left hand side and iTunes will import them as long as you've already registered iTunes for the same account.
Job done! Worked a treat for me - including the app that wasn't available any more.....

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    Message was edited by: Ingo2711

  • How can i sync my iphone to a new itunes without losing all my iphone data??? HELP

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    Music is one way only, from the computer to your device, unless you bought the songs in itunes and transferred your purchases.
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    About backups and what's saved:http://support.apple.com/kb/HT1766
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    Message was edited by: Ingo2711

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