How do I delete the trash on a secondary drive?

From the X Lab FAQ I understand that .trashes folders are created also on secondary drives.
I have set up a daily SuperDuper SmartCopy operation which clones my Home folder to a second drive (let's call it "Backup") in my Mac Pro.
Today, both Home and Backup because almost full. I emptied the trash on Home which freed up many GBs. However, running a new Smart Copy with SuperDuper didn't similarly free up space on Backup by removing the trash which must have been cloned over.
How can I remove the trash from Backup?
Cheers
P

I thought so too.
The two drives are identical and have since they were first set up been in this cloning relationship. The Home folder has 56GB available space after I emptied trash. Backup has 200kB (yes really) available and was unaffected by emptying trash.
I can't explain the space difference. Any ideas?

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