How do I not sync an application AND not delete it.

I have airshare installed on my iPod touch. and it allows me to use the iPod touch as a small external wireless file server. At the moment I have about 20GB of data managed by airshare. Every time I sync the iPod touch with iTunes, in addition to backing up my music, notes, etc, iTunes also backs up the airshare stuff. I have about 16GB of data managed by airshare. The data is always changing. Naturally, each time I do a sync it takes a good part of a day to back up (sync) the iPod.
My question is: How do I configure iTunes to NOT sync the airshare applcation and its managed data?
If I elect to not sync the airshare application, iTunes wants to delete the application and the data.
thanks in advance

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I managed to lose an earlier reply I'd started before you came back with your "solved" so I didn't bother to retype it.
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Thanks for attempting to help, but, no, ALL my music is on the external drive, and, no, iTunes does NOT delete the music from my iPhone or iPods if that disk is off or disconnected... except for the 5 mystery songs. Even if the external disk is off and iTunes can't find the songs, they remain listed in my iTunes library and I do get warnings from iTunes about them not being found, but iTunes doesn't delete them from a "mobile device" that they have already been downloaded to. I imagine that this is intentional behavior for just such situations.
As further evidence of this, the other songs on the SAME ALBUM, which were ripped at the same time, of course, are NOT deleted!
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How do I not sync an application AND not delete it.

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