How do I put together all clips? (MPEG Streamclip)

I put in a film in my computer from my Sony DCR-SR55E video camera that is in MPG.
(It is filmed on a two weeks vacation and is in 1172 files, each clip in one file you know.)
I have tried to make all clips into one in MPEG Streamclip but then it gets strange, all of a sudden it is too fast in some places of the film and the audio is out of sync.
Is the settings in MPEG Streamclip wrong?
I choose Export to QuickTime … and dosen’t do anything else, it looks like this:
http://img703.imageshack.us/img703/425/exportn.png
Or what should I do?

The DCR-SR55E records standard def 4:3 MPEG2 video.  In MPEG Streamclip you should convert the clips to QuickTime, selecting the Apple DV/DVCPRO PAL codec (compression) and the DV-PAL frame size.  (Assuming your camera is a PAL camcorder.)  In FCE select the DV PAL easy setup before importing the converted video.
The camera also has a 16:9 mode but it is not clear from the DCR-SR55E specifications whether that is anamorphic DV or simply cropped DV to make it look as if it is 16:9.  If you used 16:9 mode you will have to do some experimenting to see what frame size settings work best in MPEG Streamclip when you convert the video.
Do not use the Apple Motion JPEG codec - it is totally the wrong codec to use.

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