How Do I Save An Edited Project?

Ok.  Brand new newbie here.  Loaded a bunch of images from a directory into Aperture.  (I want to store my files in the file system, not in an Aperture library.)
Edited those files.  Now I want to save all the files, edited or otherwise, back into the same directory, overwriting files when appropriate.
How do I do that??
I've tried File->Export->Version, but it only saves one image.
My undetstanding is that Aperture does not commit edits until the files are exported. 

Exporting will create a new file for every Image you have selected.  It will not overwrite any files.
Your workflow counters much of the engineering and design that went into Aperture.  Here is a very short guide to getting started with Aperture.
Fwiw, the Aperture Library is a file system.  The Library is a Finder package.  You can see the contents of the package by right-clicking the Library (in Finder) and selecting "Show package contents".  Additionally, for advanced users, Aperture includes features for manually managing the files you import into the Library (they can be located on any drive directly connected to your machine).

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