How do you normalize your results?

hello guys
i have two sets of different output data from the same input.their difference is on their timing axis.how do you normalize these in order to compare them and see that actually are the same?
i estimate the pitch period of a signal by segmenting it into blocks of 384 samples each and it gives me 35 segments. then i segment the signal again into blocks of 320 samples each and i get 42 segments. i want to compare the 2 approaches and see that they give the same results disregarding in what segment number is found the peaks..does anybody know how do do this?
regards
madgreek
p.s if someone wants to see my vi. please let me know so i cant post it

sorry about the typo error on the p.s
i have attached my vi with an excel file with my measurements i am talking about.the first column goes from segment 1-35 while the second column goes from 1-42.
i want to compare these 2 columns on the same time axis
Attachments:
segment analysis.xls ‏24 KB
Testing Cepstrum Algo.vi.vi ‏201 KB

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