How to "choose" external hard drive

I have searched several of the internal to external HD discussions but do not know what to do when the external hard dricve does not show up so i can choose it.
I have been working on a video on my internal HD and then realize ( of course) that my internal is too small. bought a WD 320 external and hooked it up. Time machine recognized it and sent everything onto it for back up I guess. I double clicked on Mac HD on desk top> application> disk utilties and it is there so I went to Erase> Mac extended journal and titled it > security at zero out. When I went to FCE 4 >system preferences > Set, I cannot find it ( cannot open disk utilties) in order to set it as the scratch disc. When I go back in thru Mac HD again I can open the disc utitlites but none of the setting I made like ( like name and security ) were saved. Now what???
is there a way that I can do this and continue on my video seamlessly
thanks

The reason why I was asking is that when an external drive is attached it should show up on your desktop. Then from FCE you simply navigate to the drive on your desktop to choose it on your scratch disk, not go through disk utilities. It seems to me that something might be wrong with your drive if it is not showing up.
When you connect it, does it show up in Disk Utility? If so, how is the drive formatted?
And last of all, What do you mean "Time Machine used to show up on my desktop"? Time Machine is an application. Do you mean that the external drive with the Time Machine symbol used to show up on your desktop?

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