How to do a FFT tranformation for every file in a folder of another folder?

Dear all,
I have a folder A, there are seven folders in folder A, I call these seven folders B. and there are 100 files in every folder B. These files are all the data information of current.
ok, now I need to transfer every current file into a FFT tranformation, and save the transferred files corresponding to the original file.
Does anyone have some idea? Thank you for any help!
Jing

Hi Mike
In this way, How can I save the transferred files as the same way as the original files and folders?
after FFT transformation, I hope to get 100 files in every "transferred B" and seven "transferred B" folders in one "transferred A" folder.
Jing

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