How to recalibrate Macbook Pro 15" Retina Battery?

I am at my wit's end with this battery indicator! I just exchanged my macbook pro 15" (mid 2014) for a new one due to the faulty speakers and now I am having issues with my battery indicator! I just recently upgraded to Yosemite and all of a sudden my login battery indicator isn't the same as the one on my desktop. After I restarted or shut down my laptop, upon logging in, I saw that my battery was at 94%. Then after logging in my battery is at 100% (without plugging in my power adapter).
Now plugging in my charger made it all weird. At 96% (login page) my battery indicator jumped to 100% and when I logged in it stayed there. I don't know if it's my battery because this is fairly new.
I also try to use coconutBattery and got the same result as the login page indicator. It's quite frustrating as to know if my battery will run out at 10% or not without the coconutBattery app.
Does anyone have this issue as well? or am I the only one?
If anyone has this problem, does anyone know why this is happening?
My battery now is at 100% but CCB says it's 95.5%. It's very frustrating.
Should I just go back to PC world and get this exchange again??
UPDATE: I did PRAM, SMC and even reinstalled and erased disk utility but only got as far as a 2% discrepancy. Seriously I'm beginning to get very frustrated

rljtiam,
I don't know if this will help you any but I noticed that I experience the same issue on my Macbook Pro 13 inch with the battery percent being different at the login screen then compared to after I've logged in. But only when FileVault is turned on. When I have FileVault turned off the battery estimate at the login screen seems to work the same as when I'm logged it. And to make things even more strange it seems to only relate to the initial login. If after I've logged in then log out the login screen displays the same battery percent as when I'm logged in.
I noticed other little things at initial login when FileVault is turn on too. Such as no backlight on the keyboard or not being able to adjust any settings using the function keys on the keyboard.
You can see if you have FileVault turned on by going to:
System Preferences > Security and Privacy > FileVault ( Tab )
Now I'm not suggesting you turn FileVault off if it is indeed enable. I just wanted to point out that I've come across something similar and believe that FileVault is the culprit. Possible in the way it secures the system.
As for any other battery troubles your are having I'm Sorry. I don't have much experience in such and I might do as Kappy and Ralph have suggested.
Also If your interested I might send Apple some feedback. You can do so using the following links:
Related to Mac OS: https://www.apple.com/feedback/macosx.html or
Related to Macbook Pro:  https://www.apple.com/feedback/macbookpro.html
I wish you the best of luck,
Weston
Sorry if I was confusing and rambling or if you feel it doesn't help and or relate.

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