How to restore non iTunes data after an iCloud restore

Hi all
My iPod Touch 4th gen had screen issues so was replaced via the Genius Bar with a new device. Prior to this I had done a backup to iCloud and also sync'ed with iTunes.
When I turned on the new device I selected to restore from iCloud backup and this seemed to work fine - I have all my apps, Camera roll photos and iTunes purchased music. However I dont have any of my non-iTunes music or photos. I was told I got these back simply by sync'ing the new device with iTunes.
When I plug the new device (now restored from iCloud) into my computer (a windows PC), iTunes starts up and the iPod Touch appears in the device list..... but that is as far as it gets. There is no sync and when you click on the device in iTunes nothing happens - in the main window where you would have seen the iPod data stats .etc, all I see is the word "iPod" in the centre.
Can anyone shed any light on this, is there something I need to do to get iTunes to properly recognise this newly restored device??
Thanks
lobsta

You might what to say what data you have mixed and where.

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