I can only upload changes bit by bit

1/ background -
    I have my computer fixed recently. The windows has been re-installed
    and I have finished re-installing all softwares
2/ I have a (bad ?) habit uploading the whole web to the remote server periodically
    choosing  '' delete remote files not on local drive ''
    The synchronize box finally showed all files for '' PUT '' action
    I then pressed OK. The action was completed after a long time (many files)
==> but the changes did not appear on my web
3/ My findings :
  * at the left hand side (Remote server), it shows all my folders plus
    2 folders '' public_html '' & '' www '' .
    Each of them contains the same contents : all my folders
  * in order to upload changes successfully, Now ,I must drag the copy of the file from my local server
    to the public_html folder and replace the correspondent file
QUESTION 1 - what is the problem ?
                    2 - in above point 2, , where did those changes go ?

  * at the left hand side (Remote server), it shows all my folders plus
    2 folders '' public_html '' & '' www '' .
What Nancy said. Your website files must be uploaded to the public_html folder on the server for the world to see them. You should not see the public_html folder in your Remote Server view in DW - just the files and folders inside it.
This should have been explained in the welcome email sent to you by your web hosting company.
Where the screenshot in Nancy's post shows Root Directory: htdocs/, your must be Root Directory: public_html.
See http://helpx.adobe.com/dreamweaver/using/connect-remote-server.html (step 10)

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