I can't rename CR2 raw files in LR3- urgent help

Hi Guys,
First time, Ive turned to a forum, so hope this the kind of trivia you love!
I've happily been renaming the final images prior ro export from the original CR2 camera file name to a new name.
However after migrating all 2011's images to a new hard drive, I have one job that i cannot rename. Lr says "Some photos will not be renamed because that are either unwritable or missing"
The files are renamed if you attach the name whilst exporting to jpg, but not to orgianl files.
There is no little ? to indicate they are missing, so it can't be that.
I start a new catalogue for each new job, and haven't had this happen to any subsequent catalogues.
The files it seems to affect, where all shot my assistant in canon small raw- rather than the full raw?
I've checked the disk and don't seem to be able to repair permission, but as this is an external drive with out the OS, I guess you can't
Tech details:
Mac pro Quad 2.8, OS 10.6.8, LR3.3.4.1, camera RAW 6.4.1
This is driving me nuts as it means I will have to reorder them by hand and rename them one by one. ( assist forgot to sync times on cameras!)
Please help, with any suggestions.

Hmmm...two things you might try:
--Export that entire catalogue as a catalogue. (Via the File menu) See if the new catalogue has the same problem.
--Create a new empty catalogue and import the entire catalogue to it (again, as a catalogue).
Perhaps one of those things will work.Sometimes the weirdnesses get left behind.
Hal

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Hi Folks,
Thanks for your replies and assistance so far, very much appreciated. Its a very frustrating problem... this should be one of those things that just work.
I have uploaded two sample pics taken with my canon 7d. If you get a chance, could you please try opening these images to see if they work on your machine.
http://www.bespoke-gems.com/images/gemstones/misc/rawtest1_canon7d.cr2
http://www.bespoke-gems.com/images/gemstones/misc/rawtest2_canon7d.cr2
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Canon 400D Xti Rebel
Sandisk Extreme III 4gb
Atech Flash Technology "Pro-Gear" USB 2.0 card reader
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