I download updates and lose programmes

I was notified I needed to update (Java for Mac OS X 10.4 Release 6, Quicktime, Security Update 2007-009 (PowerPC)and MacOSXUpd10.4.11PPCPatch.pkg), so I did.
Now Safari, iTunes etc won't work.
I downloaded Pacifist_2.5.1 and MacOSXUpdCombo10 to fix it but the computer will not let me open them.
Any help would be appreciated.

The combo update might not have the complete applications that you have listed.
The files that Pacifist can open are .pkg (package).
The update needs to be in the package format, once there open the application section.
If they are not there, use your original system 10.4 install disks to reinstall and then update the applications.

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