I had osx version 10.6.8 i reinstalled osx with the install disk now i have 10.6.3

i had osx 10.6.8 i reinstalled with the osx install disk and now i have 10.6.3 and some of my apps are not compatible any suggestions please and thank you

It is possible you had used the Combo or software update to move from 10.6.3 to 10.6.8 prior to the reinstall.   Then when you reinstalled, the install disk took you to 10.6.3 and as MichelPM says, you will need to update again. 
The appropriate combo updater is Mac OS X 10.6.8 Update Combo v1.1   It's a big update and can take 40 minutes or more.
But you will still have to software update to pick up the latest security and iTunes updates.
Don't forget to back up your files first.

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