I installed ML on a new disk and didn't get much migration

I bought a new 750GB HD for my early 2009 MBP. I intalled ML on the new disk using a FW drive enlosure. I took the drive out of this enclosure and put it into my MAC. I took my old drive and put it into the enclosure and used migration assistant to take over all the data. I don't have any of my contacts or email setsups. I have my apps, but that is it. My desktop is also blank.
I did this once before from Leopard to SN and everyting came over fine and I was able to use my MAC right after the migration.
Is there anything I did wrong?

Repeat the process, ensuring that you erase and format the new HD properly, Mao OS Extended and with the GUID partitioning scheme. Install ML and on first boot, use the Setup Assistant to do the migration. See Pondini's Setup New Mac guide, wherein you treat the new HD as a new Mac. Then, swap the HDs.

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