I need help using multiple internal drives

I have 3 internal drives and 24GB of Ram on an early 2009 G5. I've recently upgraded one drive to yosemite but my current applications are on the other drive;  running 10.7.5.
I didn't want to reinstall all the apps on the yosemite drive so I was wondering
if there is any issue with using one drive for applications and another for work/storage.
Keeping all my apps on drive running 10.7.5 while everything else is on the Yosemite drive.
Is it advisable to do? Do the apps run any slower this way?
Thanks for any help.
M

You could add a fourth drive, clone your 10.7.5 system to it, and upgrade the clone to Yosemite. That way you still have your clean Yosemite drive and your working 10.7.5 system in case of trouble with the upgrade.
In the event that an app needs to be re-authorized when moved to a different drive, do you have a record of the relevant serial numbers?

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