IBooks to sync Bookmarks even on PDF

I just want to know that it's anyway to sycn bookmarks for every PDF in iBooks app.
Because I have to deal with a hundred page in a PDF file and it will be more easiler if i can deal it from iBooks on Mac.

I appreciated for your help. but I didn't mean about syncing the book. I want to "sync bookmarks" over the PDF file that i put and read it on iPad. I found that PDF file is something that is not complete about syncing file as it should be.
I bookmarked pages that I have to read it again or do some printed about it. But when i back to my Mac -> iBooks. the bookmarks's not there.

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