Illustrator / swatch pattern movement issue? (*advanced question)

In Illustrator CS3 I often make new swatch pattern to use as a fill. When I flll an object w/ that swatch, then copy that object, then paste it into a new file, the pattern has moved inside the object. When I paste the object within the original file I copied it, the pattern doesn't move.
How do I lock the pattern from moving or prevent it from moving? (Apple+ F or B) doesn't work.
I realized I could rename the file, save it, and make changes, as a workaround solution.  I'm looking for something more efficient, however.
Much appreciated, and props to whoever knows the answer!
JP

I realize several years have passed since this question was asked, but incase someone in the community is stil having this problem, I saved my original with the pattern as a pdf, then placed it into the new artboard/file. Before I settled on the pdf solution, I rasterized, flattened, expanded, jpg'd & png'd to no avail, they all sucked when placed into the new larger artboard bc either the pattern continued to move or the results were pixelated, even w high res.
I was making business cards, and my original artboard was 2x3.5, and I had already painstakingly moved, scaled & recolored each pattern to fit the 2x3 artboard. Then when I went to paste it into a full size 8.5x11 ai template  the pattern realigned itself to the 8.5x11 page, grr.
I'm using cs5, btw. And when you try this, the pdf preview will look crazy, but no worries, it places just fine.

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