Image doesn't match when previewed or exported

Ok, so I have just recently upgraded to the latest version of FCP studio and have been having the weirdest problem with it.
I'm working on a project with two layers of video (a full-screen image with a small box insert. The insert video plays fine but in five spots (out of an eight-minute-long video) the full screen image doesn't play the clip that's put in there.
I've double clicked the clips to verify that they're correct and they look fine on the preview monitor. I tried going in and finding the original shots and replacing them but they are still showing up as the incorrect shots in the sequence monitor. I tried going in to the render files in the document folder and deleting and re-rendering. The problem still re-occurred. I then took off the insert for those clips, rendered, and they looked fine but then when I exported to Quicktime then the wrong images re-appeared in the exported file.
Does anyone have any ideas of what may be going on here, how to fix it, and/or a good work-around?

I wonder if this has anything to do with the MacBook Pro problems?
http://www.apple.com/support/downloads/macbookprosoftwareupdate11.html
That said, I'm not sure I'd run the 1.1 update if you hadn't run the 1.0, there were so many problems with the 1.0...
Are you using filters, or just resizing the overlaid video track?
Patrick

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