Inconsistent custom table transport movement

Hi All,
I have appended new records in two custom tables and moved it from development client to quality client using one transport request. Changes to one custom table are reflected whereas the other did not in quality client. What might have caused this issue?
And if i use a new transport request to correct the issue might create an other problem. Please suggest a fix for the issue at the earliest.

Max,
Thank you for the reply.
I have generated the TR by manually placing the values in TR. This is a workbench request. The delivery class is "A" and data class is USER. I was able to insert values in table using a maintenance view but was not able to include the table changes into TR.
The other custom table where values were transported properly has delivery class "A" and data class APPL1. I was able to manually maintain and attach values to a TR and it transported perfectly to quality client.

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