Inconsistent filenames are not recognized in import - Bug?

Background:
I run a unix script that adds an "X" before the filename of any image that is locked. I do this before import so that I can filter images after import based on what I tagged in-camera.
Problem:
In the import dialog, when I choose Devices as a source, the X'ed images dont appear in the viewer. I can, on the other hand, go to Files and choose the memory card, and it will show the X'ed iimage.
This isnt that big of a deal, just two extra clicks during import. But  is there a reason for this, or this an unintented behaviour. I've changed the script to add different characters instead of the "X" but to no avail.

What type of Import are you doing:  Copy, Copy as DNG, Move, Add?
What are your source and destination folders for the import?
You could get a -2 on the end of all your files if you are accidentally doing a COPY import when you meant to do an ADD import and the source and destination are the same folder.

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