Incorrect page orientation when rendering EPS to PDF

Hi,
Using Adobe Pro 9 (tried with Adobe Pro 7 as well) trial version to convert EPS files to PDF. Was able to convert to PDF with no errors. We noticed that some of the pages within the generated PDF are oriented side ways, pages that need to be oriented portrait are rendered in landscape mode. Other pages are oriented in landscape mode which is the correct way.
I tried setting the distiller settings within 'General panel' options and setting the "Auto-Rotate pages" to be OFF. Now, the pages that are oriented side ways are now in Portrait mode, however, the other pages are being rendered orienting sideways. The same EPS file was tested on a Unix machine using a PS to PDF converter and none of the pages are oriented incorrectly.
Question is, how to set the Adobe Pro so that it retains the "original" orientation settings of that of EPS data. Quick help would be greatly appreciated. Thanks very much.

I typically use auto rotate. Auto rotate make the rotation based on the orientation of the text on the page. If it turns out wrong, I simply edit the file and use Document>Rotate Pages to rotate the problem pages as needed. Then use Save As to store the PDF. For a few pages this is probably the simplest approach. If you need more, you may want to check the manual about the rotate options at the time of creation.

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I'm having problems with the orientation of my pages when I generate pdf's from multiple postscript files.
I have 3 postscript files that need to be merged into 1 pdf, and they contain a mixture of portrait and landscape pages.
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