Interlaced frames after using Apple directions for Canon HV30 24p

I have an Canon HV30 HDV video camera and clips that have been recorded using its 24p mode. I'm using the instruction Apple has given to remedy this type of footage in Compressor and output to Pro Res:
http://support.apple.com/kb/HT2410?viewlocale=en_US
I've tried this method a couple of times and carefully also. Everything seems to work well other than the fact that I am getting interlaced frames on the last one or two frames of each clip. Sometimes it's the beginning of the clips. As they are supposed to, clips are changing to 24p and when I step through a clip frame by frame everything looks fine, except for those last couple frames. Other methods, like using JES Deinterlacer, do not produce these distorted interlaced frames. However I would prefer to use Compressor. Could it be that I changed some setting or preference in Compressor a while back that is affecting these clips right now?
Please help!
Once again, using Final Cut Studio 2 and a Canon HV30 with 24p clips.

Hello,
I experienced the same thing. But I feel that the first second or two of any clip is not useable, when
editing I have never needed every last frame.
This is not much of a help to you. I think it has to do with the mysteries of HDV, Long GOP, and 2 t0 3 pulldown and the complex post processing that must happen to yield 24 full frames.
Good luck, Tom

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