*** Interlacing on fast-moving parts

I've successfully encoded my HDV material for AppleTV in the past, but I'm having an issue. I exported a full-quality Quicktime movie from my HDV sequence in Final Cut Pro. After it was complete, I opened it in QT Pro and encoded for AppleTV. I synced it with my AppleTV and I'm noticing bad interlacing when parts of the scene move quickly. This hasn't happened in the past and I'm using the same camera (Sony HVR-Z1U) and source footage (HDV).
What could be causing this? Should I trash my preferences in QT? Should I export for AppleTV directly from the FCP timeline (I've tried this and it stretches the aspect ratio badly from left to right).
I'm stuck on this one...any help would be greatly appreciated!
Thanks in advance!

I'm afraid I don't know much about FCP, but since the QT tv preset has no settings I'd be looking at your FCP settings first on the basis it used to work for you.
The HDV full quality export is fine - no interlacing. When I export using QT Pro for AppleTV, the interlacing appears but the aspect ratio is fine. When I drop into Compressor, the interlacing is there AND the aspect ratio stretches the image.
I believe the reason why you get a distortion to your aspect ratio when you go straight from FCP to tv might be because the capture from the camera is AIC at 1440 x 1080 and not 1920 x 1080 as you might expect.
I don't ever create the file for AppleTV directly from FCP.
Any more advice? I would really like to get this one solved!

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