Internal Hard Drives not showing on desktop (Yosemite)

External drives show up just fine. Computer is a 4,1 Mac Pro upgraded with a 5,1 6-core 34.6GHz processor. Main drive is a Corsair 512GB SSD and second drive is a Seagate Hybrid. Until this problem is solved we've been obliged to return the machine to Snow Leopard. The external drive is a Seagate Barracuda 3TB with three partitions. All three partitions show up on the desktop. The enclosure is a Pleiades Firewire 800.

Choose Preferences from the Finder menu, click on General, and check the settings. If they’re correct, choose Utilities from the Go menu, open the Disk Utility, and if the drives are listed in gray, mount or repair them.
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    This procedure is a diagnostic test. It makes no changes to your data.
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