IPhone and synching Apps

I have a number of Apps ion my iPhone that I have purchased and installed via the iPhone. I am now synching to a new computer. Music is fine, However, when I checked the synch Apps bos I was warned that all my apps would be repaced by what is on the computer. I have carefully arranged my apps on my iPhone the way I want them. Is there a way to have the iPhone control the iTunes instead of the other waty?

Connect the phone but do not sync. Then choose "Transfer Purchases..." on the File menu in iTunes. Once the apps are on your computer you can sync and they should not be deleted.

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