Is there a way to transform multiple colors?

I have a project where I've been asked to allow a user to choose between multple color themes of a character. This object is complex in that it has multiple colors and that each color needs to change differently based on the theme's color scheme.
Is there a way to take a movieclip with multiple colors and apply process to it that will detect different colors and transform them accordingly without taking each individual color, making a movie clip from it, then modifying the movieclip's colors? Each character has a pretty limited color pallette, so this process would only have to find and then change maybe 3 or 4 colors. But the character in question is hand animated and has a LOT of frames, so I'm hoping there's a chance that I can handle this programmatically rather than doing it all by hand with a few hundred extra movieclips to make color changes to. Any help is greatly appreciated!

Hi, and thanks for the help.
This is the 1st time I've looked at the palletteMap method. I see in the documentation:
paletteMap(sourceBitmapData:BitmapData, sourceRect:Rectangle, destPoint:Point, redArray:Array = null, greenArray:Array = null, blueArray:Array = null, alphaArray:Array = null):void
Parameters:
sourceBitmapData:BitmapData — The input bitmap image to use. The source image can be a different BitmapData object, or it can refer to the current BitmapData instance.
sourceRect:Rectangle — A rectangle that defines the area of the source image to use as input.
destPoint:Point — The point within the destination image (the current BitmapData object) that corresponds to the upper-left corner of the source rectangle.
redArray:Array (default = null) — If redArray is not null, red = redArray[source red value] else red = source rect value.
greenArray:Array (default = null) — If greenArray is not null, green = greenArray[source green value] else green = source green value.
blueArray:Array (default = null) — If blueArray is not null, blue = blueArray[source blue value] else blue = source blue value.
alphaArray:Array (default = null) — If alphaArray is not null, alpha = alphaArray[source alpha value] else alpha = source alpha value.
I comprehend the 1st 4 parameters, but the color and alpha arrays have got me confused. How would I use these to, for instance find all the pure blue pixels in a bitmap (0x000000FF) and then change those pixels' colors to some other color, then find all the pure red pixels (0x00FF0000) and change them to yet another color? Fortunately I don't have to deal with alpha with this current delimma . . .
One other question before I look into this method as a solution, is it possible to programmatically convert vector-based artwork into a bitmap to use this colorMatrix feature? All the artwork I need to change colors on is hand drawn animation using the native Flash drawing tools. Thanks again for any additional help!

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