ISE backup ignoring subdirectory defined in repository

Greetings,
I have a repository configured like this:
repository Solarwinds_SFTP_SERVER1
url sftp://server1/ISE/
user ISE password hash <password hash>
host-key host server1
When I test with show repository, everything works correctly, I see the files in the ISE subdirectory:
# sh repository Solarwinds_SFTP_SERVER1
AdminFullDaily-131002-0100.tar.gpg
AdminFullDaily-131003-0100.tar.gpg
AdminFullDaily-131004-0100.tar.gpg
ise_catalog.xml
repolock.cfg
Test-131004-1044.tar.gpg
However, when I run a manual or scheduled backup, the ISE subdirectory is ignored, the files land in the root dir of the sftp server.
Any ideas? We are version 1.1.4 patch 2. We can't move to a newer patch until a separate issue is resolved.

Can you get the following debugs from ACS and SFTP.
debug transfer 7
debug copy 7
Corresponding logs from the sftp server.
enable the debugs on the ACS and run the command again to take backup.
~BR
Jatin Katyal
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