ITunes can't locate library on external hard-drive

I have had my iTunes library in a folder on an external E hard drive for some time, and it worked fine.
After I downloaded the latest version of iTunes - in response to a prompt from Apple - it now can't locate any of the tracks. The library is still displayed in full in the iTunes screen, but each track has an exclamation mark next to it, and if I try to play a track, iTunes tells me I have to locate it manually. If I locate a track manually, it plays, but that's obviously not ideal. Also, it won't sync my iPod, but just tells me that the named tracks can't be found.
I looked in the `iTunes music' folder in `My Music' on the C drive, and it has a handful of tracks in it. Those tracks play in iTunes as normal.
Going via Edit-Preferences-Advanced, the `iTunes media folder location' is set as the folder in my E-drive which contains my music library. I had understood that that was all I needed to do in order to enable iTunes to find my library, but I guess there must be another step I've missed.
I suspect that I should be using File-Add Folder to Library, but I'm not sure what the result will be if I do this. Will it copy the files from my E drive onto my C drive (and swallow up all the memory space on my laptop)? Will it duplicate all the tracks in the iTunes display so I have two versions of each track - one with an exclamation mark and one without? Should I delete all the tracks from iTunes before adding the folder?
Thanks for any help you can offer.

Have you assigned E: to the exHD permanently? Because Windows can change USB drive letters on you, if you don't assign them.
http://support.microsoft.com/kb/307844
That is the most common reason for itunes suddenly unable to find files.

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