ITunes doesn't show updates for those Apps synchronized from iPhone

For example, if I download 3 apps through itunes, then download and install 2 apps on my iphone. After synchronizing the PC and iphone, both of them have 5 apps. Once all of them have updates available, the app store on my iphone can show 5 updates, but iTunes only shows 3 updates, it doesn't show updates for the other two apps. Is it a setting issue? please help me if anyone has answer. Thank you.

I am syncing on my MacBook that I have had for about two months...?

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