ITunes keep saying restoring iPhone after updating to iOS 5

I have just upgraded my iPhone 4 to iOS 5. After updating, my iTunes keep saying restoring iPhone apps. Now I can use my iPhone but without my previous apps. I have also tried closing iTunes and open it again but it still says restoring iPhone apps as soon as it detact my iPhone. Does anyone knows how to solve this problem? By the way, I am using Windows.

I had the same issue with my iPad. The iPad itself thought it was fully updated (had taken me to the iCloud set up etc) but iTunes insisted it was still restoring apps. I closed down iTunes each time via the task manager.
I tried uninstalling and reinstalling iTunes, which didn't help.
What I did in the end was disconnect the iPad while iTunes was still running - without any attempt to eject it. When I then plugged it back in, it came up with an error message along the lines of "An attempt to restore this iPad was interrupted. Do you wish to continue attempting to restore?" I hit cancel, and I was then able to do a manual sync as normal, and all my app data was restored.

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