ITunes keeps forgetting settings after upgrade to 9.0.3 (15)

My iMac autoupdated itunes and now every time I log on it's as is i'm logging on for the first time, keeps asking me if I want to keep my itunes folder organised etc. I've tried uninstalling and reinstalling the software but the same problem occurs. Also each time I restart itunes it 'forgets' my iPhone is synced as a remote (using the remote app) and I then have to reset this.
No problems with any of this before the update. Anyone any ideas?
Thanks

You may have a corrupt preferences file.
Quit iTunes. Go to your user account/Library/Preferences folder, locate a file named com.apple.iTunes.plist and drag it to the trash.
Start iTunes again and complete all the setup questions. You should not have to do this again. You will have to go through all the selections in iTunes > Preferences as they will revert to default.

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