ITunes Match is duplicating files on hard drive

Almost every song/album I have ever purchased and downloaded will not play from the local file, but instead insists or 'redownloading' from the Music Match Cloud.
Eg: The album "Communards" by "The communards". As you can see iTunes is under the impression that this album is 'not' stored locally and has the 'cloud' icon, ready for me to download.
The only way these songs will play is to click them, at which point iTunes downloads the song and saves in my iTunes library.
The tracks then no longer have the 'cloud' icon on them and I can play them from the local file.
All tracks that I have done this with now have 'Display in Wiindows Explorer' in their context menu.
Any tracks that I have not gone through this process with do NOT have 'display in Windpws Explorer' in the menu but only have 'download'.
When I 'view in Window Explorer', the whole album is there - All the songs that have the iCloud icon on them are there and all song that do not are in there twice.
i.e. I end up with the original file and also the one that iTunes has insisted that I download.
There is not even an option to 'locate on my hard drive' which would enable me to point iTunes to the local file.
Why is this happening and how do I fix it?
That fact that iTunes downloads these 'cloud' files and stores them in the very same directory as the files I aready have means iTunes knows what folder to look in for this album, it simply refuses too.

I do seem to have a few duplicates.
26 tracks to a page (13 duplicates) x 17 pages = 221 duplicates.
I have 3,331 tracks in total.

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Loss of files from a Disk is certainly possible through media failure. However, the extent of iTunes Match capacity is solely to influence the content of the cloud. Perhaps there was a coincident, or pre-existing, failure of the disk which was simply exposed by the iTunes Match interrogation of the disk content.
There are certainly other services which depending upon your goal may work well. For example, Google Play with gBeats IOS App works very well. My use of Match is to synchronise across several computers and to drive Apple TV and an IOS device - other IOS devices still use sync for specific music and are complimented by gBeats for access to the full library when local mobile signal strength is high.
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If it´s physically stuck, schedule an appointment at the Genius bar of your local Retailstore to have it looked at.
If it´s not physically stuck but just unresponsive,
1. Try doing a hard reset:
Press and hold both the Home button and the Sleep/wake button simultaneously for about 15 seconds and release when the Apple logo appears.
2. If that doesn't work, backup the device and restore it as new.
In that case, use: http://support.apple.com/kb/HT4137
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If you get specific error messages/codes in iTunes when updating/restoring, check this: http://support.apple.com/kb/ts3694 for causes and solutions
If you're not able to restore the device, you should use: http://support.apple.com/kb/HT1808
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What are the iTunes library files? - http://support.apple.com/kb/HT1660
More on iTunes library files and what they do - http://en.wikipedia.org/wiki/ITunes#Media_management
What are all those iTunes files? - http://www.macworld.com/article/139974/2009/04/itunes_files.html
Where are my iTunes files located? - http://support.apple.com/kb/ht1391
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