ITunes media folder on external HD issue...

So I have a quick question...
I've been using my external HD to house my iTunes library for over a year now. No issues, it's been working great. When I add new music to my library on my computer, it copies the files to my HD, or just reorganizes the files that are there.
Now.. suddenly.. it's having issues.
I tried clearing out the library on my computer to reimport some key albums I wanted. I notice now that my iTunes is creating a second Music folder inside my already designated Music folder to place the folders... it's now moving all the albums I import from one directory to the other, and I can't figure out how to make it stop.
I've already made sure the iTunes Music folder on my computer is empty, and I've changed the designated iTunes Media folder several times, working fine, then putting it back to External HD > Music .... and it decides no music shall be placed here.
For easy reference, it's creating a path like this: External HD > Music > Music
Eh? Help is appreciated... Thank you guys.

I've been using my external HD to house my iTunes library for over a year now.
I tried clearing out the library on my computer
I thought you just said the library was on your external drive.  What's iTunes doing putting things on your computer?
How exactly did you do this move in the first place a year ago?  What was it you did recently as part of this cleaning?  I strongly suspect that's where things went wrong (maybe at both stages).
iTunes: How to move [or copy] your music to a new computer [or another drive] - http://support.apple.com/kb/HT4527
Quick procedure if you use iTunes' default preferences settings:  Copy the entire iTunes folder (and in doing so all its subfolders and files) intact to the other drive.  Open iTunes and immediately hold down the Option (alt) key (shift on Windows), then guide it to the new location of the library.
Do not confuse moving your whole folder and library with moving just media files as in
iTunes for Mac: Moving your iTunes Media folder - http://support.apple.com/kb/HT1449
If you did the move using just preferences settings then you did not move the whole library, you only told iTunes where to start storing future media.

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