JNDI returns a different class for different applications

Hello,
I have a WebSphere server that runs a JNDI service, in which I defined an entry for a ConnectionFactory declared on a remote server. On the server I run an EJB application which connects the JNDI and gets the ConnectionFactory. I also have a stand-alone Java application which gets the ConnectionFactory from the JNDI on the server.
The problem is that the implementation class for the ConnectionFactory I get is different between the EJB and the stand-alone applications. The stand-alone application recieves a MQXAQueueConnectionFactory, which is just fine because I want to use XA transactions, but the EJB application receives a JMSQueueConnectionFactoryHandle!
What can be the reason for that? How does the JNDI service determine which implementation class to return?
(I suppose that is a specific behavior for Websphere...) How can I control that, if at all?
Thanks!

I have a similar situation occurring. Was therre any resolution found?

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