JPEG Verticals NEF Horizontals

Recently, as I was loading images shot on my Nikon D70s, I noticed that my vertical images were loading as JPEG and my horizontals were loading as NEF.
Subsequent to that, I noticed that as I ran my cursor over my images in Bridge that the creator on my verticals is Quicktime and my horizontals are listed as ver 1.00.
My camera is set to shoot RAW, I have downloaded the latest version of Camera RAW. I am using Photoshop CS2 on a MacBook Pro running OSX 4.
Any thoughts?

Operating System is OSX 10.4.6 Tiger. I did have Nikon software installed at the time I loaded my images, however, I had loaded images without any problem previously. I have since taken the Nikon software off--although the advice I got from Nikon was to load into the camera software. When I load images iPhoto automatically opens. Could this be an issue?
I did try right clicking to no avail.
I have also downloaded Photoshop CS3. This will at least allow me to open Camera Raw for those blasted JPEG files, but the mystery still remains....

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