JPG transition problem

I am adding in some jpg's into my video, but some of them have a "jittery" entry when I add a transition to them. I am basically doing the Ken burns effect. But it looks like a black strobe flickering, then some of them look like the opacity is turned down. Is this a problem in the jpg, or is it something that I am doing wrong? Maybe a memory problem? The images I am using are on an external drive. Any ideas or thoughts would be great, thanks!

Okay so check that, when I set my canvas to 100% it does the same thing, so its not only on the rendered product. What is going on?

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