Just updated to 10.4.11 - Clips keep on moving into iMovie trash

I've just applied some updates (OSX 10.4.11, Quicktime 7.3, iTunes 7.5, iPhoto 7.1.1) and now I'm having a very perplexing problem with my iMovie HD (6.0.3) files.
Here's my workflow:
-Cut out unwanted footage
-Extract audio
-Import multiple image files
-Save file
Here's my problem:
When I reopen my file, iMovie states that there were some stray files found in my trash yadda yadda. I look into the trash and I find my original unedited clip. I don't empty the trash and go into timeline. Only the inserted images and the extracted audio shows up. It also doesn't maintain any of cut out clips that I left in the "Clips" area. This happens with another one of my iMovie files that I was working on earlier today. Basically, now I have to quickly finish all of my edits and additions, try not to quit iMovie, totally ignore saving, and then burn it with iDVD. I can do that, but it's disconcerting that I can't save and return back to my file without having to redo everything again.
I'm not sure what is going on, but I'm inclined to think it has something to do with the 10.4.11 update. It's also extremely annoying that everything was fine an hour ago.
I've been planning to move to Leopard (I'm an IT Analyst and I get a free copy), but I want to finish these last few projects before that. It'll take too much effort to rollback to 10.4.10 (make a backup image, reinstall 10.4, etc.).
So just to confirm my suspicions, have any one else been having the same problem after upgrading to 10.4.11? I know that I may be an isolated incident. Also, if anyone has a solution, then that would be fantastic.
Thanks.

All I can add is to say that it is really important not to update anything in the middle of editing a project...but you have already found that out-right?
Sue

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