Keep italics while styling text from Word

I have a long book with loads of endnotes. I've gotten them to come in with italics preserved. However, I still need to reset the styles for them. But any change kills all italics. Is there a way to re-style the text in general and preserve the existing italics? There are hundreds of these, so going back to touch every one is an evil undertaking.

Will do. In this case, I just needed to maintain italicized titles within endnotes. All of the endnotes are being stripped from their sections of this book and compiled in their own section in the back. So, once I bring in the content, I'm free to move them around. The issue has always been that my client never quite follows the style rules they are given to make the process flow easier. They overlap styles, apply random fonts, etc which I have not been able to get InDesign to suck in and map correctly. So, while the endnote style I mapped is applied to all of them, they still have a bogus Times Roman font applied on top. When I option + click my style, it kills off the italics in the reference titles. Same happens for the endnote reference numbers sometimes.
But, you're Find + Replace steps worked perfectly. I now know a little bit more about Find + Replace strategy. If I did more pubs of this sort, I would surely like to find ways to cut off all this issues at the pass. This pub occurs biennially so, the pain and proposed solutions fade between hits. All of the data in the pub, we have split out in Excel, which works great–tables, charts, graphs etc.
This is number 4. If the fifth one is on the table in 2012, or any others that may occur, do you have any recommended reading that covers a solid process for handling 200+ pages of endnoted content from Word...besides relying on clients to actually follow the instruction provided to them?

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