Key combinations strg+b, strg+s, strg+p are not working after swapping fn and strg

Hey guys.
I just got my brand new Lenovo e540 and I really like it. I only got one problem and would like to know if there is a fix for it.
I swapped the fn- and strg-key in BIOS setttings and everything went fine at first. But then I realized that some strg-combinations aren't working.
The following combinations are not working: strg+b, strg+p, strg+s (as far as I remember) And it is really annoying if you can't save your notepad-document with strg+s.
Now I came across these information:
Fn+B= break
Fn+P= pause
Fn+S= sysrq
Fn+C= ScrLK
Fn+I= insert
Is it possible, that this is the source of my problem? Because technically im still pressing the fn-key when doing my strg+s combinations because I swapped the keys in BIOS. The odd thing is, that strg+c is working absolutely fine.
I already tried disabling all services and programs starting when booting up the pc but the problem still occured.

I want to update the bios so much, especially because of the cleaned-up noise when using 3D...
But i can't because of the darn shortcuts (FN+S is especially  troublesome for me).
Come on guys, please add an option to disable those shortcuts or atleast make them swap when we swap ctrl+fn.

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