Lightroom 4 missing RAW files on import

After upgrading from lightroom 3 I'm having a problem importing my raw files. Most of the time Lightoom 4 will only recognize some of my .CR2 files and only the JPGS of the rest of them. The weird thing is that it's not my card reader. When I access the card through finder I can see all of my files. It's only in Lightroom that I can't access all the files.
It's very random about which CR2s will and will not be recognized at any give time. Sometimes it's one day only of a shoot, sometimes it's completely random photos spread across different days. I always shoot RAW+JPEG on a Canon 60D. As of now I just keep plugging and unplugging my card until all the RAWs show up for an import but this is annoying and time consuming. Anybody know what's going on?

Suggest you try the 4.1RC (available here: http://labs.adobe.com/downloads/lightroom4-1.html) as there were some bugs in this area which were fixed in the RC.

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