LMS 4.1 Network Topology Layer 2 view - Re layout map not working

I've finally got Topology Data Collection working on Prime LMS 4.1.
However, when I run Network Topology Layer 2 view and try and re-layout the view to any of the options, Circular, Hierarchical, Symmetrical or Orthogonal, the map never re-draws to that type of layout.It always stays as a mess.
I think it must be a 'feature'.
Any ideas ?
Cheers
Barry

I searched again and didn't find any errors in the same line as the IP or Hostname of the unconnected switches. But I did notice that these switches and all of the devices upstream have "Discovery ani TopoSMFGenerateAbstractTopology" lines where the rest have "Discovery ani TopoSMFGenerateCdpTopology". Do I need to delete everything upstream to the seed device and then rerun a Data Collection? I've included the log. One of the unconnected switches is: 192.168.40.11 Display name: TC160_C. Thanks again.

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