Logged Timecode Changes after Batch Capture

I'm working with the Kona 3 and the Panasonic D5 (HD3700B)
I'm having a problem with FCP changing my logged clip TC after Batch Capture in 720p 59.94. This problem only occurs in 720p mode, 1080i is just fine.
While capturing 720p 59.94 from the D5
In FCP when I log a clip at:
01:20:00:00 in
01:20:30:00 out
After Batch Capture is complete the clip shows up in the browser as:
01:19:55:05 in
01:20:25:05 out
FCP is effectively changing the logged timecode of the clip. I'm capturing with burned in TC and the Burned in TC is Frame accurate, but why is FCP changing the clip's TC?
In all my experience with FCP I have never encountered this issue and I am completely puzzled. I've contacted AJA and they have said that they do not know of this issue and were puzzled also. I am using a Tri-Level Sync and everything seems to be getting proper reference.
There is no reason why FCP should be changing my logged clip settings. (right?) Also, I tried a test where I made the clip that came in with the bad timecode offline, and then ran a Batch Capture again, and it changes the logged timecode even further. I've tried a variety of Device Control settings playing with frame offset etc with all having the exact same numeric result (see TC above).
Anyone who has any insight or similar experience your thoughts are greatly appreciated. Thanks for the help
Ted - Editor, NYC

The BITC matches the original Logged TC (even though the logged TC changes after capture)
Logged TC (Media Start/End in FCP)
01:20:00:00, 01:20:30:00
Captured TC (Media Start/End in FCP)
01:19:25:05, 01:20:25:05
Burned in TC Captured (Viewable on Video File)
01:20:00:00, 01:20:00:00
I'm very curious about what yourlooking at on the deck manual. Page 145??? I don't see a page 145. It's been my understanding that the Monitor HD-SDI does produce the 720p 59.94 signal, and that's what all my monitors and Kona say that their getting.
Also, could you clarify your last sentence.
*"Forgive my guessing but this deck looks like it really wants to work in 1080 and 720 is kind of there to step up from 8 bit DVCPro HD."*
I dont think that its a 23.98 issue and our source tape is not 23.98, even still if it was, it shouldn't effect the logged TC.... but I'll try it in the morning, could'nt hurt.
Update: A person over the phone at Apple "didn't" (did) say over the phone that upgrading to 5.1 (universal) would improve 720p capabilities.
So the next step will be giving more money to Apple for Universal and installing the new Kona drivers released yesterday.....and then let the testing fun begin again.
Thanks so much for your help, please let me know where to find that info in the D5 (3700B) manual. Cheers.

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    While capturing 720p 59.94 from the D5
    In FCP when I log a clip at:
    01:20:00:00 in
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    FCP is effectively changing the logged timecode of the clip.
    In all my experience with FCP I have never encountered this issue and I am completely puzzled. I've contacted AJA and they have said that they do not know of this issue and were puzzled also. The only thing about my current configuration that is not completely right is that I am not using a Tri-Level Sync at the moment. We get ours tomorrow. AJA suggests using the Tri-Level Sync with the Kona 3 card, but would that cause a glitch of this nature? I will try again tomorrow of course and update, but does having bad 720p reference effect how FCP logs and handles TC? To my knowledge it shouldn't and makes me think that there may be some sort of FCP error occurring. There is no reason why FCP should be changing my logged clip settings. Also, I tried a test where I made the clip that came in with the bad timecode offline, and then ran a Bath Capture again, and it changes the logged timecode even further. I've tried a variety of Device Control settings playing with frame offset etc with all having the exact same numeric result (see TC above).
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    I dont think that its a 23.98 issue and our source tape is not 23.98, even still if it was, it shouldn't effect the logged TC.... but I'll try it in the morning, could'nt hurt.
    Update: A person over the phone at Apple "didn't" (did) say over the phone that upgrading to 5.1 (universal) would improve 720p capabilities.
    So the next step will be giving more money to Apple for Universal and installing the new Kona drivers released yesterday.....and then let the testing fun begin again.
    Thanks so much for your help, please let me know where to find that info in the D5 (3700B) manual. Cheers.

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