Logic Can't Locate Audio Files, Random Freak Occurrence?

I'm not sure if anyone else has experienced this, but today I was asked to bounced down an instrumental of a remix that I had finished a few weeks ago. So when I went to go open up the project, Logic was saying that it couldn't find 3 audio files now all of a sudden, which were all vocal tracks by the way.
At first I thought Logic was looking for edited audio files because the file names had something like this after them... "#21312.wav". I did not see actual audio files that had any of these edited names so I thought that I had really lost the edited audio files some how, but what I did actually see with those edited names were actual folders inside the "Edits" folder of the project folder.
After the project had opened, I looked inside the Media bay window and the three audio files that Logic could not find had an exclamation mark next to them obviously. So I thought about trying something... I double clicked on the exclamation mark on each of the missing files again and I just decided to see what would happen if I chose the audio with out the "#12321.wav" names. It seems as though everything loaded fine and that those "#234323.wav" are not actual files, but folders with edit instructions for the original file in the "audio" folder of a project folder.
This has been the first and hopefully the last time it has happened to me (knock on wood), and I'm just wondering if anyone else has experienced this before? I would love to know why it happened out of the blue. Logic 8 has been good to me so far, hardly any crashes or other problems, hopefully it's just a random one time freak occurrence!

I did have this issue early on in version 7. It had to do with where I stored certain files and it happened after switching from a G5 to an Intel Mac. I think the issue came from having my Logic content on a separate drive and folder, and when I reinstalled logic I didn't use the same folder for its content.

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