Lync 2013 Client - Not saving persistent chat options between logins

We run Lync Server 2013. The Persistent Chat options for When a new Message arrives, Show the message in a new window, Show me an alert and Play this sound do not stay checked. They will spontaneously uncheck themselves. We have confirmed it's not an Antivirus
issue. We are using folder redirection on the desktop and my documents folder. Where are these settings stored? It's very annoying that they do not stick. I can replicate with over 100 users. 

We are having similar issues at our company as well, and would like some kind of answers or feedback please. Our issue is that when we select the "Persistant Chat" options, they dont seem to do anything at all meaning the alerts dont work, etc. If we log
out and back in they still dont function, but they are still checked. When we reboot the entire PC then they revert back to being "unchecked".
We previously had 2010 lync and 2010 group chat installed, we removed 2010 normal lync but group chat was still installed. We got the settings in lync 2013 working correctly for a short time by uninstalling everything lync, and reinstalling only 2013 version,
but after 2-3 days and 1-2 reboots later, the issue returns.
I hope someone can assist us, otherwise we will have to find a different solution for our business.

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