Mac Pro - Scrolling/moving windows Really Jerky and delayed....

Not sure what's happeneing here... This is a brand New Machine, with ProTools 8 Installed as the only major program. There are ProTools Cards (HD2) and a BalckMagic Decklink HD Pro.
When ever I open a new windown In Finder, Safari, or any other program, the scrolling function is extremely jerky, delayed, and unusable. Moving a window around on the desktop is the same. Otherwise, computer seems fine. ANy ideas onhow to deal with this? This simply can't be right. Myn Other Mac Pro (2008) works just fine.
Thanks,
Todd A.

Are there updates for BlackMagic or ProTools to be more compatible?
When did you last run Disk Warrior?
Any problem installing and updating software or drivers?
Can you do a clean install or have a backup copy and try?
Last and least desireable, try with just basic hardware and system.
Your 2009 has a later build of OS X that still isn't out publicly. It should and could be used on your old Mac Pro and you could test it there. But your system from the 2008, that won't run properly at all on this system.

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