Macbook Pro not Booting Properly 50% of the time.

I have a 3 year old Macbook Pro 13.3 Inch that I use for school.  However over the course of the last 6 months it has begun to only boot up fully into OSX Lion about half of the time. The other 50% of the time it "freezes" during boot up and although I can move the mouse around the home screen, I cannot do anythign else besides do a forced shut down and reboot by holding the power button.   Everything LOOKS like it loads except my IDISK icon, If the IDISK does not show up, then I know the computer did not fully boot, Howver If i can see my IDISK on my desktop, the computer is fully booted and works fine.  Ive looked online for others having this same problem, and I have done a full wipe and reinstall from my time capsule with no luck, same problem.   I have not found any threads like this and the guys at the Genius Bar had no idea how to correct it, any ideas?
Do I need to completely wipe the drive and partition and start with a fresh copy of LION that is NOT from my time capsule?   If I do that can I retrieve certain things off of time capsule?
Any ideas would be helpful, the computer runs perfectly except for only booting 50% of the time.
Thanks

Lion on to old of a machine is likely your cause, revert back to Snow Leopard
How to revert your Mac to Snow Leopard

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