Macbook won't boot up, can't find HD then it can find it?

I have a macbook pro (purchased in 08). Last week I got the beach ball of death while on the internet with Safari. I forced it to shut down. When I tried to restart it, all I could get was the grey screen with Apple logo and spinning cog thing. I've been able to boot it from the original installation disks, but the first few times I tried, disk utility could not see my hard drive. I put the computer down for a few days and when I rebooted from the cd and ran disk utility- there was my hard drive! So I repaired the disk- says it appears to be ok, then I verified, says ok. I ran the disk permissions and it froze again. When I rebooted, no hard drive found again. Ugh. The 60th time retrying, it found it again and I once again repaired and verified. I am in the process of repairing disk permissions again. Any Help? Since I can see my hard drive how can I transfer the data off the old macbook onto my new macbook pro? Thanks!

You can use the Disk Utility to clone to an external hard drive the contents of the internal hard drive,  while booted from the DVD.   The Utilities menu of the installer offers a Disk Utility.  Note the external hard drive must be bigger than the internal, and empty.   See my FAQ*:
http://www.macmaps.com/clonedu.html
And I'd make a copy to two hard drives.  That way if changing anything in your internal is needed, you won't lose any data.  If the clone fails, we may need to look at data recovery options from the beginning of my backup FAQ.

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