Managed System Config: Wily BC path /usr/sap/ SID /JC instance is not a directory for BI Java Instance

We are getting error message "Wily BC patch /usr/sap/<SID>/JC06 is not a directory while doing managed systems setup. System verification is successful. The Java directory should be /usr/sap/<SID>/J06 in our case, which is showing correctly in LMDB. Any idea?
I have done the usual resynch SLD, Rerun system verification and reset managed systems configuration etc.

Hi Tariq,
Please enter complete path like below and check  :
/usr/sap/<ManagedSID>/<InstanceID>/ByteCodeAdapter
Also check below SAP note for details :
1943583 - Wily Agent Directory files are Missing after Network loss - Solution manager 7.1
Hope this helps.
Thanks & Regards,
Nisha

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    -> arg[ 22]: -Dsys.global.dir=E:\usr\sap\JPD\SYS\global
    -> arg[ 23]: -Dapplication.home=E:\usr\sap\JPD\JC00\exe
    -> arg[ 24]: -Djava.class.path=E:\usr\sap\JPD\JC00\exe\jstartup.jar;E:\usr\sap\JPD\JC00\exe\jvmx.jar;.\bin\boot\boot.jar;.\bin\boot\jaas.jar;.\bin\system\bytecode.jar;.
    -> arg[ 25]: -Djava.library.path=C:\j2sdk1.4.2_13-x64\jre\bin\server;C:\j2sdk1.4.2_13-x64\jre\bin;C:\j2sdk1.4.2_13-x64\bin;E:\usr\sap\JPD\JC00\j2ee\os_libs;D:\oracle\JPD\102\bin;C:\j2sdk1.4.2_13-x64\bin;E:\usr\sap\JPD\SYS\exe\uc\NTAMD64
    -> arg[ 26]: -Dmemory.manager=1024M
    -> arg[ 27]: -Xmx1024M
    -> arg[ 28]: -Xms1024M
    -> arg[ 29]: -DLoadBalanceRestricted=no
    -> arg[ 30]: -Djstartup.mode=JCONTROL
    -> arg[ 31]: -Djstartup.ownProcessId=2244
    -> arg[ 32]: -Djstartup.ownHardwareId=R0075126991
    -> arg[ 33]: -Djstartup.whoami=server
    -> arg[ 34]: -Djstartup.debuggable=no
    -> arg[ 35]: -Xss2m
    -> arg[ 36]: -DSAPINFO=JPD_00_server
    -> arg[ 37]: -DSAPSTARTUP=1
    -> arg[ 38]: -DSAPSYSTEM=00
    -> arg[ 39]: -DSAPSYSTEMNAME=JPD
    -> arg[ 40]: -DSAPMYNAME=julee_JPD_00
    -> arg[ 41]: -DSAPDBHOST=julee
    -> arg[ 42]: -Dj2ee.dbhost=julee
    CompilerOracle: exclude com/sapportals/portal/pb/layout/taglib/ContainerTag addIviewResources
    CompilerOracle: exclude com/sap/engine/services/keystore/impl/security/CodeBasedSecurityConnector getApplicationDomain
    CompilerOracle: exclude com/sap/engine/services/rmi_p4/P4StubSkeletonGenerator generateStub
    CompilerOracle: exclude com/sapportals/portal/prt/util/StringUtils escapeToJS
    CompilerOracle: exclude com/sapportals/portal/prt/core/broker/PortalServiceItem startServices
    CompilerOracle: exclude com/sap/engine/services/webservices/server/deploy/WSConfigurationHandler downloadFile
    CompilerOracle: exclude com/sapportals/portal/prt/jndisupport/util/AbstractHierarchicalContext lookup
    CompilerOracle: exclude com/sapportals/portal/navigation/cache/CacheNavigationNode getAttributeValue
    CompilerOracle: exclude com/sapportals/portal/navigation/TopLevelNavigationiView PrintNode
    CompilerOracle: exclude com/sapportals/wcm/service/ice/wcm/ICEPropertiesCoder encode
    CompilerOracle: exclude com/sap/lcr/pers/delta/importing/ObjectLoader loadObjects
    CompilerOracle: exclude com/sap/engine/services/webservices/jaxrpc/encoding/InstanceBuilder readElement
    CompilerOracle: exclude com/sap/engine/services/webservices/jaxrpc/encoding/InstanceBuilder readSequence
    CompilerOracle: exclude com/sap/engine/services/webservices/jaxrpc/encoding/TypeMappingImpl initializeRelations
    CompilerOracle: exclude com/sap/engine/services/webservices/jaxrpc/encoding/GeneratedComplexType _loadInto
    [Thr 784] JHVM_LoadJavaVM: Java VM created OK.
    JHVM_BuildArgumentList: main method arguments of node [server0]
    [Thr 2632] Tue Jun 21 15:37:13 2011
    [Thr 2632] JHVM_RegisterNatives: registering methods in com.sap.bc.krn.perf.PerfTimes
    [Thr 2632] Tue Jun 21 15:37:14 2011
    [Thr 2632] JHVM_RegisterNatives: registering methods in com.sap.bc.proj.jstartup.JStartupFramework
    Exception in thread "Thread-1" [Thr 2632] *** ERROR => JHVM_RegisterNatives: registration for method nativeTrace (ILjava/lang/String;I)V failed. [jhvmxx.c     387]
    Exception in thread "Thread-1" [Thr 2632] *** ERROR => JHVM_RegisterNatives: registration for class com.sap.bc.proj.jstartup.JStartupFramework failed. [jhvmxx.c     402]
    [Thr 2632] Tue Jun 21 15:37:16 2011
    [Thr 2632] JLaunchISetClusterId: set cluster id 9765450
    [Thr 2632] Tue Jun 21 15:37:17 2011
    [Thr 2632] JLaunchISetState: change state from [Initial (0)] to [Waiting for start (1)]
    [Thr 2632] JLaunchISetState: change state from [Waiting for start (1)] to [Starting (2)]
    Tue Jun 21 15:37:29 2011
    32.693: [GC 32.693: [DefNew: 87552K->5616K(131328K), 0.0379367 secs] 87552K->5616K(1004800K), 0.0380208 secs]
    Tue Jun 21 15:37:35 2011
    39.239: [GC 39.239: [DefNew: 93168K->10731K(131328K), 0.0522776 secs] 93168K->10731K(1004800K), 0.0523620 secs]
    Tue Jun 21 15:37:42 2011
    46.142: [GC 46.142: [DefNew: 98283K->11872K(131328K), 0.0369234 secs] 98283K->11872K(1004800K), 0.0369857 secs]
    Tue Jun 21 15:37:44 2011
    48.101: [GC 48.101: [DefNew: 99424K->15175K(131328K), 0.0416394 secs] 99424K->15175K(1004800K), 0.0416992 secs]
    Tue Jun 21 15:37:47 2011
    50.864: [GC 50.864: [DefNew: 102727K->17598K(131328K), 0.0535968 secs] 102727K->17598K(1004800K), 0.0536599 secs]
    Tue Jun 21 15:37:56 2011
    59.912: [GC 59.912: [DefNew: 105150K->20359K(131328K), 0.0552269 secs] 105150K->20359K(1004800K), 0.0553026 secs]
    Tue Jun 21 15:38:05 2011
    68.822: [GC 68.822: [DefNew: 107911K->27950K(131328K), 0.0925732 secs] 107911K->27950K(1004800K), 0.0927059 secs]
    Tue Jun 21 15:38:22 2011
    86.155: [GC 86.155: [DefNew: 115502K->32318K(131328K), 0.0952289 secs] 115502K->32318K(1004800K), 0.0953143 secs]
    [Thr 3836] Tue Jun 21 15:38:24 2011
    [Thr 3836] JHVM_RegisterNatives: registering methods in com.sap.mw.rfc.driver.CpicDriver
    [Thr 3920] JHVM_RegisterNatives: registering methods in com.sap.security.core.server.vsi.service.jni.VirusScanInterface
    Tue Jun 21 15:38:25 2011
    89.549: [GC 89.550: [DefNew
    Tue Jun 21 15:38:26 2011
    : 119870K->37903K(131328K), 0.0946425 secs] 119870K->37903K(1004800K), 0.0947168 secs]
    [Thr 2632] Tue Jun 21 15:38:30 2011
    [Thr 2632] JLaunchISetState: change state from [Starting (2)] to [Starting applications (10)]
    93.769: [GC 93.769: [DefNew: 125455K->39983K(131328K), 0.0848278 secs] 125455K->39983K(1004800K), 0.0848963 secs]
    Tue Jun 21 15:38:42 2011
    106.101: [GC 106.101: [DefNew: 127535K->40711K(131328K), 0.1103185 secs] 127535K->44523K(1004800K), 0.1104881 secs]
    Tue Jun 21 15:38:48 2011
    111.757: [GC 111.758: [DefNew: 128263K->37882K(131328K), 0.0922447 secs] 132075K->46051K(1004800K), 0.0923087 secs]
    Tue Jun 21 15:38:53 2011
    116.821: [GC 116.821: [DefNew: 125434K->41012K(131328K), 0.0868214 secs] 133603K->49181K(1004800K), 0.0868870 secs]
    Tue Jun 21 15:38:58 2011
    121.834: [GC 121.834: [DefNew: 128564K->40328K(131328K), 0.0883693 secs] 136733K->50264K(1004800K), 0.0884344 secs]
    Tue Jun 21 15:39:02 2011
    125.894: [GC 125.894: [DefNew: 127880K->38270K(131328K), 0.1261970 secs] 137816K->50849K(1004800K), 0.1262624 secs]
    Tue Jun 21 15:39:03 2011
    Excluding compile:  com.sap.engine.services.webservices.jaxrpc.encoding.TypeMappingImpl::initializeRelations
    Tue Jun 21 15:39:06 2011
    129.644: [GC 129.644: [DefNew: 125822K->39879K(131328K), 0.0743170 secs] 138401K->52458K(1004800K), 0.0743815 secs]
    Tue Jun 21 15:39:09 2011
    133.455: [GC 133.455: [DefNew: 127431K->41403K(131328K), 0.0858201 secs] 140010K->55026K(1004800K), 0.0858849 secs]
    Tue Jun 21 15:39:11 2011
    Excluding compile:  com.sap.engine.services.webservices.jaxrpc.encoding.InstanceBuilder::readElement
    Excluding compile:  com.sap.engine.services.webservices.jaxrpc.encoding.GeneratedComplexType::_loadInto
    Tue Jun 21 15:39:12 2011
    136.149: [GC 136.149: [DefNew: 128955K->38683K(131328K), 0.0844984 secs] 142578K->56636K(1004800K), 0.0845627 secs]
    Tue Jun 21 15:39:17 2011
    140.904: [GC 140.904: [DefNew: 126235K->42612K(131328K), 0.0888091 secs] 144188K->60566K(1004800K), 0.0888767 secs]
    Tue Jun 21 15:39:20 2011
    144.177: [GC 144.177: [DefNew: 130164K->39791K(131328K), 0.0883459 secs] 148118K->62169K(1004800K), 0.0884110 secs]
    Tue Jun 21 15:39:23 2011
    Excluding compile:  com.sap.engine.services.webservices.jaxrpc.encoding.InstanceBuilder::readSequence
    147.268: [GC 147.268: [DefNew: 127343K->33797K(131328K), 0.0799426 secs] 149721K->62721K(1004800K), 0.0800037 secs]

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