Merging Layers Discards Bevel Effect

Been dealing with this for a while, and it appears others have also, according to research. Layers with a layer style applied, mostly of the bevel or emboss variety, lose the effect when the layers are merged or the image flattened. Doesn't seem to happen with any other styles, like drop shadows or glows: those will stay, but the bevel will not. These are all Normal layers, nothing tricky going on. It's a program fault and I need to know if there's a workaround. I'm having to resort to saving the whole unflattened image as a jpeg so the client can proof the work, but sooner or later I'm going to need to flatten the image.
Using Mac PS CS5 Extended, abundance of RAM & Disk space.
Thanks for any help.
Cayce

It does happen with other effects too.
As far as making it more perfect, there is a configuration change you can make that will make Photoshop calculate everything at 100% size under the covers, then downsize for display, but it comes with some possible nasty side effects.  For one, since it's doing everything at full size it may slow WAYYY down, and for another not all GPUs can handle it.  But if you want to try, the configuration change is this:  In the Performance Prefs, change Cache Levels to 1, then close and restart Photoshop.
Please be aware that this may destabilize your system, and if you find yourself thinking "wow, this is sluggish!" you'll know why.
I actually use this setting for my 32 bit Photoshop only (I'm on Windows), because it also causes layer compositing to be done in full 16 bit precision (which I find useful for astroimage processing).  The nice thing is that the two versions (32 and 64 bit) keep their configurations separately, so all I need to do to get high quality compositing is just run the 32 bit version.
More than you wanted to know, probably. 
-Noel

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